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NEXT-GENERATIO
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“NEXT-GENERATION DNA SEQUENCING INFORMATICS 2nd Edition edited by Stuart M. Brown Cold Spring Harbor ”... Read moreabout condition
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Estimated between Mon, 17 Nov and Sat, 22 Nov to 94104
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eBay item number:205796439977
Item specifics
- Condition
- Very Good
- Seller Notes
- Series
- Landmarks in Science and Medicine Ser.
- ISBN
- 9781621821236
About this product
Product Identifiers
Publisher
Cold Spring Harbor Laboratory Press
ISBN-10
1621821234
ISBN-13
9781621821236
eBay Product ID (ePID)
204343510
Product Key Features
Number of Pages
402 Pages
Publication Name
Next-Generation D N A Sequencing Informatics, Second Edition
Language
English
Subject
Life Sciences / Molecular Biology, Life Sciences / Cell Biology, Life Sciences / Genetics & Genomics, Genetics
Publication Year
2015
Features
Revised
Type
Textbook
Subject Area
Science, Medical
Format
Hardcover
Dimensions
Item Height
1.2 in
Item Weight
35.3 Oz
Item Length
10.3 in
Item Width
7.2 in
Additional Product Features
Edition Number
2
Intended Audience
Scholarly & Professional
LCCN
2015-012098
Dewey Edition
23
Reviews
"Next-Generation DNA Sequencing Informatics (2nd edition)...is a book to get you well and truly started in Bioinformatics....the chapters appear to flow well internally and cover the main aspects of the methods presented. Certainly the QC and RNA-seq chapters will point students or newbioinformaticians in the right direction....this book is likely to be a good one to have on your shelf."--CoreGenomics blog
Illustrated
Yes
Dewey Decimal
572.8/633
Edition Description
Revised edition
Table Of Content
Preface Acknowledgments About the Authors 1. Introduction to DNA Sequencing Stuart M. Brown 2. Quality Control and Data Preprocessing Stuart M. Brown 3. History of Sequencing Informatics Stuart M. Brown 4. Public Sequence Databases Stuart M. Brown 5. Visualization of Next-Generation Sequencing Data Phillip Ross Smith, Kranti Konganti, and Stuart M. Brown 6. DNA Sequence Alignment Efstratios Efstathiadis 7. Genome Assembly Using Generalized de Bruijn Digraphs D. Frank Hsu 8. De Novo Assembly of Bacterial Genomes from Short Sequence Reads Silvia Argimón and Stuart M. Brown 9. De Novo Transcriptome Assembly Lisa Cohen, Steven Shen, and Efstratios Efstathiadis 10. Genome Annotation Steven Shen and Stuart M. Brown 11. Using Next-Generation Sequencing to Detect Sequence Variants Jinhua Wang, Zuojian Tang, and Stuart M. Brown 12. ChIP-seq Stuart M. Brown, Zuojian Tang, Christina Schweikert, and D. Frank Hsu 13. RNA Sequencing with Next-Generation Sequencing Stuart M. Brown and Jeremy Goecks 14. Metagenomics Guillermo I. Perez-Perez, Miroslav Blumenberg, and Alexander V. Alekseyenko 15. Proteogenomics Kelly V. Ruggles and David Fenyö 16. Emerging DNA Sequencing Technologies and Applications Gerald A. Higgins and Brian D. Athey 17. Cloud-Based Next-Generation Sequencing Informatics Konstantinos Krampis, Efstratios Efstathiadis, and Stuart M. Brown Glossary Index
Synopsis
Next-generation DNA sequencing (NGS) technology has revolutionized biomedical research, making genome and RNA sequencing an affordable and frequently used tool for a wide variety of research applications including variant (mutation) discovery, gene expression, transcription factor analysis, metagenomics, and epigenetics. Bioinformatics methods to support DNA sequencing have become and remain a critical bottleneck for many researchers and organizations wishing to make use of NGS technology. Next- Generation DNA Sequencing Bioinformatics, Second Edition, provides thorough, plain language introduction to the necessary informatics methods and tools for analyzing NGS data as did the first edition, and provides detailed descriptions of algorithms, strengths and weaknesses of specific tools, pitfalls and alternative methods. Four new chapters in this edition cover: experimental design, sample preparation, and quality assessment of NGS data; Public databases for DNA Sequencing data; De novo transcript assembly; proteogenomics; and emerging sequencing technologies. The remaining chapters from the first edition have been updated with the latest information. This book also provides extensive reference to best- practice bioinformatics methods for NGS applications and tutorials for common workflows. The second edition of Next-Generation DNA Sequencing Bioinformatics addresses the informatics needs of students, laboratory scientists, and computing specialists who wish to take advantage of the explosion of research opportunities offered by new DNA sequencing technologies., ext-Generation DNA Sequencing Bioinformatics, Second Edition, provides thorough, plain language introduction to the necessary informatics methods and tools for analyzing NGS data as did the first edition, and provides detailed descriptions of algorithms, strengths and weaknesses of specific tools, pitfalls and alternative methods. Four new chapters in this edition cover: experimental design, sample preparation, and quality assessment of NGS data; Public databases for DNA Sequencing data; De novo transcript assembly; proteogenomics; and emerging sequencing technologies., Next-generation DNA sequencing (NGS) technology has revolutionized biomedical research, making genome and RNA sequencing an affordable and frequently used tool for a wide variety of research applications including variant (mutation) discovery, gene expression, transcription factor analysis, metagenomics, and epigenetics. Bioinformatics methods to support DNA sequencing have become and remain a critical bottleneck for many researchers and organizations wishing to make use of NGS technology. This new edition provides a thorough, plain-language introduction to the necessary informatics methods and tools for analyzing NGS data and provides detailed descriptions of algorithms, strengths and weaknesses of specific tools, pitfalls, and alternative methods. Four new chapters cover experimental design, sample preparation, and quality assessment of NGS data; public databases for DNA sequencing data; de novo transcript assembly; proteogenomics; and emerging sequencing technologies. The remaining chapters from the first edition have been updated with the latest information. This book also provides extensive reference to best-practice bioinformatics methods for NGS applications and tutorials for common workflows. This edition addresses the informatics needs of students, laboratory scientists, and computing specialists who wish to take advantage of the explosion of research opportunities offered by new DNA sequencing technologies. Authors Alexander Alekseyenko Silvia Argimón Brian D. Athey Miroslav Blumenberg Stuart M. Brown Lisa Cohen Efstratios Efstathiadis David Fenyö Jeremy Goecks Gerald A. Higgins D. Frank Hsu Kranti Konganti Konstantinos Krampis Guillermo I. Perez-Perez Kelly V. Ruggles Christina Schweikert Steven Shen Phillip Ross Smith Zuojian Tang Jinhua Wang
LC Classification Number
QP625.N89N485 2015
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